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Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller,
W. & Lipman, D. J. (1997).
- Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs.
Nucleic Acids Res., 25(17):3389-3402.
-
Benson, D. A., Karsch-Mizrachi, I., Lipman, D. J., Ostell, J., Rapp, B. A. &
Wheeler, D. L. (2002).
- GenBank.
Nucl. Acids Res., 30(1):17-20.
URL http://nar.oupjournals.org/cgi/content/abstract/30/1/17.
-
Berman, H. M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T. N., Weissig,
H., Shindyalov, I. N. & Bourne, P. E. (2000).
- The Protein Data Bank.
Nucleic Acids Res., 28(1):235-242.
-
Boeckmann, B., Bairoch, A., Apweiler, R., Blatter, M.-C., Estreicher, A.,
Gasteiger, E., Martin, M. J., Michoud, K., O'Donovan, C., Phan, I., Pilbout,
S. & Schneider, M. (2003).
- The SWISS-PROT protein knowledgebase and its supplement TrEMBL in
2003.
Nucleic Acids Res., 31(1):365-370.
-
Gutiérrez-Ríos, R., Rosenblueth, D., Loza, J., Huerta, A., Glasner, J.,
Blattner, F. & Collado-Vides, J. (2004).
- Regulatory Network of Escherichia coli: Consistency Between
Literature Knowledge and Microarray Profiles.
Genome Res., 13:2435-2443.
-
Henikoff, S. & Henikoff, J. G. (1993).
- Performance evaluation of amino acid substitution matrices.
Proteins, 17(1):49-61.
-
Müller, H., Kenny, E. & Sternberg, P. (2004).
- Textpresso: An Ontology-Based Information Retrieval and Extraction
System for Biological Literature.
PLoS Biol., 2(11):e309.
-
Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994).
- CLUSTAL W: improving the sensitivity of progressive multiple sequence
alignment through sequence weighting, position-specific gap penalties and
weight matrix choice.
Nucleic Acids Res., 22(22):4673-4680.
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Bruno Contreras Moreira
2007-06-15